Index du paquetage • startbox

Toutes les fonctions

block_tnt(): Tnt by block

check_daily_meteo(): Check if meteo data are daily or hourly

check_heteroscedasticity(): Bartlett on residuals

check_normality(): Residual normality test

check_plotid_diff(): Check differences in plot_id

check_pom_csv(): Check for required columns in a data frame

check_standard_file(): Check if the file provided is a xlsx standardised file

check_topvigne_csv(): Check if a CSV file is in TopVigne format

check_xptrtcode_diff(): Check differences in xp_trt_code

efficacy(): Calcul of efficacy according to the Abbott's formula

export_data_sheets(): Export observation sheets into a new Excel file version

export_stats_sheets(): Export Prepared Data and Statistics to a Timestamped Excel File

find_vars(): Look star variables in a dataframe

getdataframe(): Extract dataframe from an user_data object by his name (looking in obs_data and prepared_data)

get_template_excel(): get_template_excel

harmonize_column_types(): Harmonize Column Types

harmonize_plot_id_format(): Harmonize plot_id format to match placette (e.g. 10A to A10)

ht_efficacy(): Calcul efficacy according to the Henderson and Tilton formula

import_pom_csv(): Import meteo data from a EPICURE POM csv file

import_topvigne_csv(): Import topvigne observational data from a Topvigne csv file

incidence(): calculation of disease incidence

intensity(): calculation of disease intensity

load_data_sheets(): Import "data_*" sheets from an Excel file into a user_data object

load_default_dictionary(): load default dictionary

load_excel_file(): Load data from an standardized Excel file into R environment

load_metadata_sheets(): Load Metadata Sheets from Excel Trial File

load_meteo(): Load meteo data from Excel sheet

merge_data_plotdesc(): Merged a dataset with plot description

merge_data_xpdesc(): Merged a dataset with experimental treatment description

nearest_tnt(): Find nearest tnt from plot

obsnames(): Names of data observations available in an user_data objetc

order_factor_levels_numeric_last(): Ordering factors

plot_meteo(): Plot ombrothermic meteo chart

plot_xpbar(): Barplot summary for an experiment

plot_xpheat(): Plot a Heatmap of Experimental Data

prepare_data(): Prepare data

prepare_excel_model(): Prepare Excel Trial File from Template

prpnames(): Names of data observations available in an user_data objetc

qq_residual_plot(): Q-Q plot of residuals

resume_pivot_wider(): Pivot wider a resume dataframe

save_data_to_excel(): Save Combined Data to a Versioned Excel File

severity_diseased(): calculation of disease severity

standardise_data(): Standardize an experimental data file or data frame

standardise_pom_csv(): Standardisation of POM csv file

standardise_topvigne_csv(): Standardize a raw TopVigne CSV file

statsnames(): Names of stats available in an user_data objetc

stat_on_data(): Statistic pipeline for data analysis

test_stats(): Perform ANOVA or Kruskal-Wallis test and group comparison

to_posix(): Convert heterogeneous date/time inputs to POSIXct (UTC)

wrapper_data(): Wrapper to load all relevant data for plotting